BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F09SP1|AL425004
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig145 1690 0.0
>3x_Contig145
Length = 1450
Score = 1690 bits (847), Expect = 0.0
Identities = 871/884 (98%), Gaps = 1/884 (0%)
Strand = Plus / Plus
Query: 1 atcgtcctgtggaataatggtattccatccaatttcgggaacacttttaccttcactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atcgtcctgtggaataatggtattccatccaatttcgggaacacttttaccttcactgat 257
Query: 61 atcaaatttggacaaagtacctgggattaaacctaaccctctgcttgaaggagattcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atcaaatttggacaaagtacctgggattaaacctaaccctctgcttgaaggagattcaga 317
Query: 121 agatccatcgaaaagcgcttgcwagccaacacaaatacccatcaacggccttccggatgc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 318 agatccatcgaaaagcgcttgcaagccaacacaaatacccatcaacggccttccggatgc 377
Query: 181 watataatctttgataggttgctcaaacccacgagaagttaagttatcgacaaaatggcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aatataatctttgataggttgctcaaacccacgagaagttaagttatcgacaaaatggcc 437
Query: 241 aaaattaccgacacctggcaggatgattctttcagcagtttgtwactctggatctgaagc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 438 aaaattaccgacacctggcaggatgattctttcagcagtttgtaactctggatctgaagc 497
Query: 301 agacttgattaatcttgtctcgtaacctaaatgattgatagcattctgcaaggattgcwa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 498 agacttgattaatcttgtctcgtaacctaaatgattgatagcattctgcaaggattgcaa 557
Query: 361 attaccagattccacatcaataatatgcacgactgttattgtgatttactgtagtcgcta 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 558 attaccagattccacatcaataatatgcacgactgtcattgtgatttactgtagtcgcta 617
Query: 421 ccagtcgtttgctgtttatcctttgawatctcttgctgacgatatatcctcatcgataca 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 618 ccagtcgtttgctgtttatcctttgaaatctcttgctgacgatatatcctcatcgataca 677
Query: 481 cttgtatttcataagattagattcgttagttctgtattttctattattttwwwaaaaaat 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 678 cttgtatttcataagattagattcgttagttctgtattttctattattttaaaaaaaaat 737
Query: 541 taaaccttttcgaaacttcagaagagaatcagagagtgagttattgacagggttcaagtt 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 738 taaaccttttcgaaacttcagaagagaatcagagagtgagtcattgacagggttcaagtt 797
Query: 601 aaaatgagttgttganatcagtcattgacaatccaccaacccattctgctgttaacttat 660
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aaaatgagttgttgaaatcagtcattgacaatccaccaacccattctgctgttaacttat 857
Query: 661 aatgttcttgctagagttttattaaaacg-agcccatgattttttttatctattcatgtc 719
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 858 aatgttcttgctagagttttattaaaacgaagcccatgattttttttatctattcatgtc 917
Query: 720 tttccgtgttgtaattagactattatatacaaatcgttaaattcagcaattgaacgaaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 tttccgtgttgtaattagactattatatacaaatcgttaaattcagcaattgaacgaaaa 977
Query: 780 gattatttaaataaaaacgtgtttcaaatgggtactcaggtattcatatgttttctttta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 gattatttaaataaaaacgtgtttcaaatgggtactcaggtattcatatgttttctttta 1037
Query: 840 tgattattgatatgaagtttattmagtgttcttcttttttagtt 883
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1038 tgattattgatatgaagtttattcagtgttcttcttttttagtt 1081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7057
Number of Sequences: 1807
Number of extensions: 7057
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)